Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs34166054 chr6:28065801 T/C 2.05E-8 288 25.6 27.8 9.77 KM Plot
KIRP rs34194357 chr6:27818535 A/G 1.23E-8 289 25.62 27.78 9.77 KM Plot
KIRP rs34218844 chr6:28290647 T/C 1.38E-8 289 25.6 26.4 9.77 KM Plot
KIRP rs34243448 chr6:28193102 C/A 1.42E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs34267313 chr15:60794589 A/T 3.78E-5 286 25.5 28.03 14.88 KM Plot
KIRP rs34276172 chr18:32847251 CG/C 5.97E-5 288 10.7 29.03 25.57 KM Plot
KIRP rs34306787 chr1:231553842 TATA/T 0.000176 285 24.8 29.77 19.9 KM Plot
KIRP rs34309119 chr16:1024588 C/T 2.8E-9 277 26.7 22.68 10.97 KM Plot
KIRP rs34349668 chr6:28437763 AGAG/A 2.06E-8 284 25.58 26.4 9.77 KM Plot
KIRP rs34371502 chr6:28081758 T/C 1.42E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs34395192 chr18:32830487 T/TAGGC 6.03E-5 288 10.7 29.5 25.53 KM Plot
KIRP rs34396849 chr6:28250955 A/C 0 289 25.6 26.58 9.38 KM Plot
KIRP rs34399638 chr16:1014880 G/A 0.000163 280 26.7 22.68 11.17 KM Plot
KIRP rs34409918 chr6:27685348 A/G 1.21E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs34432857 chr6:27685825 G/A 1.21E-8 288 25.58 29.2 9.77 KM Plot